| 1 | | Reading | 2 | 3 |
| 1 | | Leyton Orient | 40 | 23 (1 pen) |
| 2 | | Luton Town | 2 | 2 |
| 3 | | Milton Keynes Dons | 2 | 2 |
| 3 | | Exeter City | 46 | 19 (2 pen) |
| 4 | | Huddersfield Town | 2 | 2 |
| 5 | | Bromley | 2 | 2 |
| 6 | | Plymouth Argyle | 35 | 16 (1 pen) |
| 6 | | Leyton Orient | 2 | 1 |
| 7 | | Cambridge United | 2 | 1 |
| 8 | | Barnsley | 37 | 15 |
| 8 | | Leicester City | 1 | 1 |
| 9 | | Blackpool | 43 | 15 (1 pen) |
| 9 | | Blackpool | 2 | 1 |
| 10 | | Cardiff City | 34 | 14 (1 pen) |
| 10 | | Luton Town | 2 | 1 |
| 11 | | Stevenage Borough | 46 | 14 (4 pen) |
| 11 | | Stevenage Borough | 2 | 1 |
| 12 | | Doncaster Rovers | 46 | 13 |
| 12 | | Wigan Athletic | 2 | 1 |
| 13 | | Barnsley | 24 | 13 |
| 13 | | Luton Town | 2 | 1 |
| 14 | | Burton Albion | 45 | 13 (3 pen) |
| 14 | | Peterborough United | 2 | 1 |
| 15 | | AFC Wimbledon | 36 | 12 |
| 15 | | Leyton Orient | 2 | 1 |
| 16 | | Peterborough United | 1 | 1 |
| 16 | | Peterborough United | 34 | 12 |
| 17 | | Bolton Wanderers | 48 | 12 (1 pen) |
| 17 | | Wigan Athletic | 2 | 1 |
| 18 | | Rotherham United | 31 | 12 (3 pen) |
| 18 | | Burton Albion | 2 | 1 |
| 19 | | Luton Town | 37 | 12 (4 pen) |
| 19 | | Stockport County | 2 | 1 |
| 20 | | Wycombe Wanderers | 2 | 1 |
| 20 | | Peterborough United | 44 | 11 |
| 21 | | Bolton Wanderers | 44 | 11 |
| 21 | | Blackpool | 2 | 1 |
| 22 | | Oxford United | 2 | 1 |
| 22 | | Lincoln City | 31 | 11 |
| 23 | | Burton Albion | 2 | 1 |
| 23 | | Cardiff City | 36 | 11 |
| 24 | | Notts County | 2 | 1 |
| 24 | | Lincoln City | 41 | 11 (1 pen) |
| 25 | | Cambridge United | 2 | 1 |
| 26 | | Bradford City | 40 | 11 (2 pen) |
| 26 | | Notts County | 2 | 1 |
| 27 | | Reading | 46 | 11 (5 pen) |
| 27 | | Burton Albion | 2 | 1 |
| 28 | | Stockport County | 2 | 1 |
| 29 | | Leyton Orient | 2 | 1 |
| 29 | | Huddersfield Town | 23 | 10 |
| 30 | | Blackpool | 2 | 1 |
| 30 | | Bradford City | 34 | 10 (1 pen) |
| 31 | | Plymouth Argyle | 2 | 1 |
| 31 | | Lincoln City | 45 | 10 (2 pen) |
| 32 | | Burton Albion | 38 | 9 |
| 32 | | Cambridge United | 2 | 1 |
| 33 | | Cambridge United | 2 | 1 |
| 33 | | Reading | 42 | 9 |
| 34 | | Oxford United | 2 | 1 |
| 34 | | Bolton Wanderers | 37 | 9 |
| 35 | | Sheffield Wednesday | 2 | 1 |
| 36 | | Wycombe Wanderers | 37 | 9 (1 pen) |
| 36 | | Bradford City | 2 | 1 |
| 37 | | Barnsley | 43 | 9 (1 pen) |
| 37 | | Huddersfield Town | 2 | 1 |
| 38 | | Mansfield Town | 27 | 9 (2 pen) |
| 38 | | Oxford United | 2 | 1 |
| 39 | | AFC Wimbledon | 28 | 9 (4 pen) |
| 39 | | Doncaster Rovers | 2 | 1 |
| 40 | | Bradford City | 2 | 1 |
| 41 | | Luton Town | 2 | 1 |
| 42 | | Huddersfield Town | 2 | 1 |
| 43 | | Milton Keynes Dons | 2 | 1 |
| 44 | | Cardiff City | 40 | 8 |
| 44 | | Stockport County | 2 | 1 |
| 45 | | Mansfield Town | 2 | 1 |
| 45 | | Cardiff City | 31 | 8 |
| 46 | | Wycombe Wanderers | 2 | 1 |
| 46 | | Cardiff City | 42 | 8 |
| 47 | | Northampton Town | 33 | 8 (1 pen) |
| 47 | | Notts County | 1 | 1 |
| 48 | | Stockport County | 1 | 1 |
| 48 | | Leyton Orient | 21 | 8 (1 pen) |
| 49 | | Mansfield Town | 2 | 1 |
| 49 | | Doncaster Rovers | 40 | 8 (4 pen) |
| 50 | | Stockport County | 44 | 8 (5 pen) |
| 50 | | Leicester City | 2 | 1 |
| 51 | | Stevenage Borough | 2 | 1 |
| 51 | | Exeter City | 35 | 7 |
| 52 | | Bradford City | 2 | 1 |
| 52 | | Barnsley | 42 | 7 |
| 53 | | Plymouth Argyle | 2 | 1 |
| 53 | | Stockport County | 22 | 7 |
| 54 | | Mansfield Town | 2 | 1 |
| 54 | | Lincoln City | 32 | 7 |
| 55 | | Oxford United | 2 | 1 (1 pen) |
| 55 | | Lincoln City | 34 | 7 |
| 56 | | Sheffield Wednesday | 2 | 1 (1 pen) |